RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g04950.1 View Network Show in Genome Browser |
| Other Names | Os07g0142500 |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2181828-2182644 Nucleotide Length: 507 |
| Protein-coding | LOC_Os07g04950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g57210 LOC_Os05g31770 LOC_Os02g57220 LOC_Os06g40120 LOC_Os03g61200 LOC_Os03g59020 LOC_Os04g54940 LOC_Os03g26450 LOC_Os02g08480 LOC_Os06g50050 LOC_Os02g07720 More.. |
| Downstream Genes | LOC_Os11g43640 LOC_Os07g05810 LOC_Os07g09510 LOC_Os08g28190 LOC_Os12g40780 LOC_Os10g25110 LOC_Os07g23200 LOC_Os10g42790 LOC_Os08g38570 LOC_Os11g48090 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g04950.1 |
| Rice Genome Annotation | LOC_Os07g04950.1 |
| Ricechip | LOC_Os07g04950.1 |
| KEGG | osa:4342378 dosa:Os07t0142500-00 |
| Entrez-Gene | 4342378 |