RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05180.1 View Network Show in Genome Browser |
| Other Names | Os07g0145300 |
| Description | Skp1 family, dimerisation domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2311418-2311912 Nucleotide Length: 495 |
| Protein-coding | LOC_Os07g05180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27160 LOC_Os02g47870 LOC_Os01g27150 LOC_Os05g05700 LOC_Os01g43540 LOC_Os04g56070 LOC_Os05g13300 LOC_Os02g15220 LOC_Os01g01700 LOC_Os01g32930 LOC_Os03g53230 More.. |
| Downstream Genes | LOC_Os11g48030 LOC_Os11g42160 LOC_Os11g26910 LOC_Os09g36830 LOC_Os10g05800 LOC_Os08g28820 LOC_Os09g10200 LOC_Os08g28800 LOC_Os09g10260 LOC_Os12g08280 LOC_Os09g10270 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05180.1 |
| Rice Genome Annotation | LOC_Os07g05180.1 |
| Ricechip | LOC_Os07g05180.1 |