RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05400.1 View Network Show in Genome Browser |
| Other Names | Os07g0147900 |
| Description | ferredoxin--NADP reductase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2476835-2480202 Nucleotide Length: 1137 |
| Protein-coding | LOC_Os07g05400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g40990 LOC_Os05g42350 LOC_Os01g25484 LOC_Os02g52730 LOC_Os02g22260 LOC_Os04g17050 LOC_Os04g58090 LOC_Os05g48310 LOC_Os05g48220 LOC_Os02g54470 LOC_Os03g27290 More.. |
| Downstream Genes | LOC_Os09g20090 LOC_Os08g36480 LOC_Os08g36500 LOC_Os07g12890 LOC_Os07g32570 LOC_Os08g05880 LOC_Os08g42380 LOC_Os07g42960 LOC_Os11g03670 LOC_Os10g41410 LOC_Os07g38930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05400.1 |
| Rice Genome Annotation | LOC_Os07g05400.1 |
| Ricechip | LOC_Os07g05400.1 |
| KEGG | osa:4342399 dosa:Os07t0147900-01 |
| Entrez-Gene | 4342399 |