RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05480.1 View Network Show in Genome Browser |
| Other Names | Os07g0148900 |
| Description | photosystem I reaction center subunit, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2546427-2547414 Nucleotide Length: 402 |
| Protein-coding | LOC_Os07g05480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g33830 LOC_Os04g38410 LOC_Os05g48630 LOC_Os06g01210 LOC_Os06g15400 LOC_Os03g39610 LOC_Os03g22370 LOC_Os03g09220 LOC_Os04g16680 LOC_Os03g17070 LOC_Os01g41710 More.. |
| Downstream Genes | LOC_Os11g13890 LOC_Os07g37240 LOC_Os12g07210 LOC_Os11g07020 LOC_Os08g33820 LOC_Os07g37550 LOC_Os08g10020 LOC_Os11g47970 LOC_Os08g02630 LOC_Os12g19470 LOC_Os12g19381 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05480.1 |
| Rice Genome Annotation | LOC_Os07g05480.1 |
| Ricechip | LOC_Os07g05480.1 |
| KEGG | osa:4342404 dosa:Os07t0148900-01 |
| Entrez-Gene | 4342404 |