RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05570.2 View Network Show in Genome Browser |
| Other Names | Os07g0150100 |
| Description | ERD4 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2601187-2606225 Nucleotide Length: 2079 |
| Protein-coding | LOC_Os07g05570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g04240 LOC_Os06g15990 LOC_Os02g41550 LOC_Os02g36960 LOC_Os02g48840 LOC_Os03g01190 LOC_Os01g74000 LOC_Os05g25310 LOC_Os02g03100 LOC_Os03g21620 LOC_Os05g38530 More.. |
| Downstream Genes | LOC_Os08g10570 LOC_Os07g30300 LOC_Os07g48290 LOC_Os07g44660 LOC_Os10g11140 LOC_Os08g36320 LOC_Os09g30150 LOC_Os08g20270 LOC_Os11g47760 LOC_Os09g38030 LOC_Os10g41930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05570.2 |
| Rice Genome Annotation | LOC_Os07g05570.2 |
| Ricechip | LOC_Os07g05570.2 |
| KEGG | osa:4342407 dosa:Os07t0150100-01 |
| Entrez-Gene | 4342407 |