RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05800.1 View Network Show in Genome Browser |
| Other Names | Os07g0152700 |
| Description | glutathione S-transferase, N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2791450-2792557 Nucleotide Length: 576 |
| Protein-coding | LOC_Os07g05800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g23620 LOC_Os01g70960 LOC_Os04g32660 LOC_Os02g32120 LOC_Os01g54540 LOC_Os05g15370 LOC_Os07g01870 LOC_Os05g15360 LOC_Os03g46040 LOC_Os05g41810 LOC_Os03g63500 More.. |
| Downstream Genes | LOC_Os12g10604 LOC_Os07g46440 LOC_Os10g27450 LOC_Os12g03090 LOC_Os11g03400 LOC_Os07g37030 LOC_Os08g16480 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 |
| Metacyc Pathways | PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05800.1 |
| Rice Genome Annotation | LOC_Os07g05800.1 |
| Ricechip | LOC_Os07g05800.1 |
| KEGG | osa:4342418 dosa:Os07t0152700-00 |
| Entrez-Gene | 4342418 |