RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05940.1 View Network Show in Genome Browser |
| Other Names | Os07g0154100 |
| Description | 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2870686-2872832 Nucleotide Length: 1749 |
| Protein-coding | LOC_Os07g05940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6249a osa-miR6249b |
| Pathways | |
|---|---|
| KEGG Pathways | rn00906 rn01110 rn01100 |
| Metacyc Pathways | PWY-695 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05940.1 |
| Rice Genome Annotation | LOC_Os07g05940.1 |
| Ricechip | LOC_Os07g05940.1 |
| KEGG | osa:4342424 dosa:Os07t0154100-01 |
| Entrez-Gene | 4342424 |