RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g05960.1 View Network Show in Genome Browser |
| Other Names | Os07g0154400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 2883039-2892647 Nucleotide Length: 4383 |
| Protein-coding | LOC_Os07g05960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g43610 LOC_Os05g23950 LOC_Os02g39290 LOC_Os04g14190 LOC_Os01g01689 LOC_Os02g06640 LOC_Os04g14110 LOC_Os04g53620 LOC_Os04g43300 |
| Downstream Genes | LOC_Os11g40150 LOC_Os12g08070 LOC_Os12g31370 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g05960.1 |
| Rice Genome Annotation | LOC_Os07g05960.1 |
| Ricechip | LOC_Os07g05960.1 |
| KEGG | osa:4342426 dosa:Os07t0154400-01 |
| Entrez-Gene | 4342426 |