RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06450.1 View Network Show in Genome Browser |
| Other Names | Os07g0158300 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3122611-3124604 Nucleotide Length: 1047 |
| Protein-coding | LOC_Os07g06450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38750 LOC_Os01g71190 LOC_Os06g20320 LOC_Os01g69950 LOC_Os04g23820 LOC_Os02g33450 LOC_Os01g43070 LOC_Os01g72800 LOC_Os04g01540 LOC_Os02g39870 LOC_Os03g50270 More.. |
| Downstream Genes | LOC_Os12g35630 LOC_Os08g15460 LOC_Os12g02380 LOC_Os11g02450 LOC_Os10g30870 LOC_Os08g02340 LOC_Os09g29980 LOC_Os11g32320 LOC_Os08g27010 LOC_Os12g17910 LOC_Os11g23790 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06450.1 |
| Rice Genome Annotation | LOC_Os07g06450.1 |
| Ricechip | LOC_Os07g06450.1 |
| KEGG | osa:4342438 dosa:Os07t0158300-01 |
| Entrez-Gene | 4342438 |