RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06610.1 View Network Show in Genome Browser |
| Other Names | Os07g0160000 |
| Description | ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3207122-3214059 Nucleotide Length: 2658 |
| Protein-coding | LOC_Os07g06610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g26890 LOC_Os02g22090 LOC_Os01g27630 LOC_Os04g56350 LOC_Os03g44310 LOC_Os03g18510 LOC_Os03g21550 LOC_Os01g27390 |
| Downstream Genes | LOC_Os09g24250 LOC_Os11g11070 LOC_Os07g46660 LOC_Os11g07870 LOC_Os12g09120 LOC_Os10g25320 LOC_Os08g25200 LOC_Os10g41520 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06610.1 |
| Rice Genome Annotation | LOC_Os07g06610.1 |
| Ricechip | LOC_Os07g06610.1 |
| KEGG | osa:4342448 dosa:Os07t0160000-00 |
| Entrez-Gene | 4342448 |