RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06620.3 View Network Show in Genome Browser |
| Other Names | Os07g0160100 |
| Description | YABBY domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3221592-3229297 Nucleotide Length: 471 |
| Protein-coding | LOC_Os07g06620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47600 |
| Downstream Genes | LOC_Os08g01100 |
| Reference | |
|---|---|
| PubMed | 15604733 17216490 17369428 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06620.3 |
| Rice Genome Annotation | LOC_Os07g06620.3 |
| Ricechip | LOC_Os07g06620.3 |
| KEGG | osa:4342449 dosa:Os07t0160100-01 |
| Entrez-Gene | 4342449 |