RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06680.1 View Network Show in Genome Browser |
| Other Names | Os07g0160600 |
| Description | fasciclin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3258237-3262151 Nucleotide Length: 1440 |
| Protein-coding | LOC_Os07g06680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48270 LOC_Os05g32110 LOC_Os04g59330 LOC_Os01g67240 LOC_Os05g03174 LOC_Os01g70180 LOC_Os05g32500 LOC_Os01g54620 LOC_Os03g12250 LOC_Os04g33990 LOC_Os05g11010 More.. |
| Downstream Genes | LOC_Os09g36350 LOC_Os09g32080 LOC_Os07g43990 LOC_Os08g23180 LOC_Os09g07350 LOC_Os07g26440 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06680.1 |
| Rice Genome Annotation | LOC_Os07g06680.1 |
| Ricechip | LOC_Os07g06680.1 |
| KEGG | osa:4342453 dosa:Os07t0160600-01 |
| Entrez-Gene | 4342453 |