RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06710.1 View Network Show in Genome Browser |
| Other Names | Os07g0161000 |
| Description | tetratricopeptide repeat, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3270360-3275944 Nucleotide Length: 1644 |
| Protein-coding | LOC_Os07g06710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g59394 LOC_Os03g22140 LOC_Os03g19200 LOC_Os06g41750 LOC_Os03g15740 LOC_Os02g51730 LOC_Os01g68680 LOC_Os05g31062 LOC_Os01g42960 LOC_Os03g50010 LOC_Os07g02300 More.. |
| Downstream Genes | LOC_Os12g41190 LOC_Os10g32300 LOC_Os09g36740 LOC_Os07g49000 LOC_Os08g44510 LOC_Os07g27180 LOC_Os07g29360 LOC_Os10g36250 LOC_Os08g39080 LOC_Os10g39900 LOC_Os10g32348 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06710.1 |
| Rice Genome Annotation | LOC_Os07g06710.1 |
| Ricechip | LOC_Os07g06710.1 |
| KEGG | osa:4342455 dosa:Os07t0161000-01 |
| Entrez-Gene | 4342455 |