RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06820.2 View Network Show in Genome Browser |
| Other Names | Os07g0162300 |
| Description | serine/threonine-protein kinase RIO-like, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3324858-3329955 Nucleotide Length: 1575 |
| Protein-coding | LOC_Os07g06820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g09570 LOC_Os01g66520 LOC_Os07g01920 LOC_Os03g02420 LOC_Os01g57910 LOC_Os01g51620 LOC_Os02g02360 LOC_Os06g23440 LOC_Os02g19770 LOC_Os06g47840 LOC_Os04g43140 More.. |
| Downstream Genes | LOC_Os09g18320 LOC_Os10g31520 LOC_Os07g47420 LOC_Os11g16480 LOC_Os08g05880 LOC_Os07g08030 LOC_Os10g28640 LOC_Os07g41190 LOC_Os11g37080 LOC_Os09g30210 LOC_Os09g35670 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6246 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06820.2 |
| Rice Genome Annotation | LOC_Os07g06820.2 |
| Ricechip | LOC_Os07g06820.2 |
| KEGG | osa:4342459 dosa:Os07t0162300-01 |
| Entrez-Gene | 4342459 |