RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06950.1 View Network Show in Genome Browser |
| Other Names | Os07g0163800 |
| Description | ubiquitin carboxyl-terminal hydrolase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3411719-3424507 Nucleotide Length: 2997 |
| Protein-coding | LOC_Os07g06950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08200 LOC_Os05g23950 LOC_Os02g39290 LOC_Os04g14190 LOC_Os06g19680 LOC_Os03g13170 LOC_Os04g14110 LOC_Os04g59560 LOC_Os02g32430 LOC_Os03g50350 LOC_Os03g50340 More.. |
| Downstream Genes | LOC_Os12g08070 LOC_Os09g39500 LOC_Os08g13030 LOC_Os08g12960 LOC_Os08g13000 LOC_Os08g13180 LOC_Os08g13070 LOC_Os09g04110 LOC_Os08g03530 LOC_Os08g13090 LOC_Os07g46160 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06950.1 |
| Rice Genome Annotation | LOC_Os07g06950.1 |
| Ricechip | LOC_Os07g06950.1 |
| KEGG | osa:4342469 dosa:Os07t0163800-01 |
| Entrez-Gene | 4342469 |