RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g06970.1 View Network Show in Genome Browser |
| Other Names | Os07g0164000 |
| Description | HEN1, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3429443-3434747 Nucleotide Length: 2781 |
| Protein-coding | LOC_Os07g06970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g04940 LOC_Os01g49250 LOC_Os04g11440 LOC_Os04g39280 LOC_Os02g37920 LOC_Os02g29464 LOC_Os01g24750 LOC_Os03g25260 LOC_Os04g42330 |
| Downstream Genes | LOC_Os07g47150 LOC_Os07g23169 LOC_Os08g40820 LOC_Os11g36390 |
| Reference | |
|---|---|
| PubMed | 20805329 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g06970.1 |
| Rice Genome Annotation | LOC_Os07g06970.1 |
| Ricechip | LOC_Os07g06970.1 |
| KEGG | osa:4342471 dosa:Os07t0164000-01 |
| Entrez-Gene | 4342471 |