RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g07000.1 View Network Show in Genome Browser |
| Other Names | Os07g0164300 |
| Description | syntaxin, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3446343-3450353 Nucleotide Length: 912 |
| Protein-coding | LOC_Os07g07000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73230 LOC_Os06g04450 LOC_Os05g48020 LOC_Os06g02570 LOC_Os03g58840 LOC_Os03g06960 LOC_Os02g25580 LOC_Os02g02720 LOC_Os05g44310 LOC_Os02g24080 LOC_Os02g32740 More.. |
| Downstream Genes | LOC_Os08g18110 LOC_Os07g09600 LOC_Os08g08060 LOC_Os10g06540 LOC_Os08g17600 LOC_Os07g38730 LOC_Os10g10500 LOC_Os12g35620 LOC_Os12g09089 LOC_Os10g20240 LOC_Os08g14640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g07000.1 |
| Rice Genome Annotation | LOC_Os07g07000.1 |
| Ricechip | LOC_Os07g07000.1 |
| KEGG | osa:4342474 dosa:Os07t0164300-01 |
| Entrez-Gene | 4342474 |