RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g07020.1 View Network Show in Genome Browser |
| Other Names | Os07g0164600 |
| Description | mediator of RNA polymerase II transcription subunit 31, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3459831-3462109 Nucleotide Length: 609 |
| Protein-coding | LOC_Os07g07020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g11370 LOC_Os04g56640 LOC_Os05g18790 LOC_Os04g09800 LOC_Os02g10050 LOC_Os03g51080 LOC_Os05g06350 LOC_Os04g33060 LOC_Os03g44484 LOC_Os06g22560 LOC_Os03g13300 More.. |
| Downstream Genes | LOC_Os09g35920 LOC_Os08g39160 LOC_Os08g36320 LOC_Os10g42950 LOC_Os08g24400 LOC_Os09g02700 LOC_Os09g36440 LOC_Os09g10960 LOC_Os11g11070 LOC_Os12g43100 LOC_Os08g09320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g07020.1 |
| Rice Genome Annotation | LOC_Os07g07020.1 |
| Ricechip | LOC_Os07g07020.1 |
| KEGG | osa:4342476 dosa:Os07t0164600-01 |
| Entrez-Gene | 4342476 |