RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g07220.1 View Network Show in Genome Browser |
| Other Names | Os07g0166600 |
| Description | LSM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3574404-3576953 Nucleotide Length: 786 |
| Protein-coding | LOC_Os07g07220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01250 LOC_Os03g13760 LOC_Os04g39444 LOC_Os02g37430 LOC_Os02g03440 LOC_Os03g29740 LOC_Os01g15310 LOC_Os06g40600 LOC_Os05g32310 LOC_Os03g25980 LOC_Os01g43170 More.. |
| Downstream Genes | LOC_Os11g43620 LOC_Os08g05530 LOC_Os08g08040 LOC_Os08g37960 LOC_Os07g07610 LOC_Os10g06130 LOC_Os07g47630 LOC_Os09g20590 LOC_Os10g34520 LOC_Os07g10256 LOC_Os10g31900 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g07220.1 |
| Rice Genome Annotation | LOC_Os07g07220.1 |
| Ricechip | LOC_Os07g07220.1 |
| KEGG | osa:9270807 dosa:Os07t0166600-01 |
| Entrez-Gene | 9270807 |