RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g07260.1 View Network Show in Genome Browser |
| Other Names | Os07g0167100 |
| Description | glutamine-dependent NAD, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3600677-3610796 Nucleotide Length: 2208 |
| Protein-coding | LOC_Os07g07260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g11320 LOC_Os03g07910 LOC_Os02g52360 LOC_Os02g42350 LOC_Os02g42330 LOC_Os06g10420 LOC_Os01g65520 LOC_Os03g58700 LOC_Os03g27230 LOC_Os05g04220 LOC_Os03g05730 More.. |
| Downstream Genes | LOC_Os12g31830 LOC_Os07g31340 LOC_Os07g30170 LOC_Os10g28020 LOC_Os08g27490 LOC_Os07g45430 LOC_Os08g37790 LOC_Os07g42960 LOC_Os10g41480 LOC_Os10g30100 LOC_Os08g19850 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2874 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00760 rn01100 |
| Metacyc Pathways | PYRIDNUCSYN-PWY PYRIDNUCSAL-PWY PWY-5381 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g07260.1 |
| Rice Genome Annotation | LOC_Os07g07260.1 |
| Ricechip | LOC_Os07g07260.1 |
| KEGG | osa:4342490 dosa:Os07t0167100-01 |
| Entrez-Gene | 4342490 |