RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g07470.1 View Network Show in Genome Browser |
| Other Names | Os07g0170100 |
| Description | transketolase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3718641-3722651 Nucleotide Length: 1113 |
| Protein-coding | LOC_Os07g07470 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g21160 LOC_Os06g04270 LOC_Os06g13720 LOC_Os04g02900 LOC_Os02g50620 LOC_Os05g03480 LOC_Os01g22520 LOC_Os05g06750 LOC_Os05g48450 LOC_Os04g19740 LOC_Os03g01600 More.. |
| Downstream Genes | LOC_Os12g08260 LOC_Os07g49520 LOC_Os09g24320 LOC_Os12g08170 LOC_Os07g22720 LOC_Os10g40200 LOC_Os08g33440 LOC_Os12g43590 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00280 rn01100 rn01110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g07470.1 |
| Rice Genome Annotation | LOC_Os07g07470.1 |
| Ricechip | LOC_Os07g07470.1 |
| KEGG | osa:4342508 dosa:Os07t0170100-01 |
| Entrez-Gene | 4342508 |