RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g07540.1 View Network Show in Genome Browser |
| Other Names | Os07g0171100 |
| Description | SHOOT1 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3759923-3762065 Nucleotide Length: 1008 |
| Protein-coding | LOC_Os07g07540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47020 LOC_Os04g41340 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g07540.1 |
| Rice Genome Annotation | LOC_Os07g07540.1 |
| Ricechip | LOC_Os07g07540.1 |
| KEGG | osa:4342513 dosa:Os07t0171100-02 |
| Entrez-Gene | 4342513 |