RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g07550.1 View Network Show in Genome Browser |
| Other Names | Os07g0171200 |
| Description | galactose-1-phosphate uridyl transferase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3762246-3766453 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os07g07550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g61710 LOC_Os04g51880 LOC_Os06g48940 LOC_Os02g04840 LOC_Os05g51670 LOC_Os02g38200 LOC_Os03g50350 LOC_Os03g50340 LOC_Os02g43020 LOC_Os04g40310 LOC_Os05g48810 More.. |
| Downstream Genes | LOC_Os10g11140 LOC_Os09g04110 LOC_Os10g35290 LOC_Os08g28730 LOC_Os09g15420 LOC_Os10g06720 LOC_Os12g38380 LOC_Os09g39590 LOC_Os10g35990 LOC_Os09g38530 LOC_Os08g33340 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00520 rn01100 rn01110 |
| Metacyc Pathways | GALACTMETAB-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g07550.1 |
| Rice Genome Annotation | LOC_Os07g07550.1 |
| Ricechip | LOC_Os07g07550.1 |
| KEGG | osa:4342514 dosa:Os07t0171200-01 |
| Entrez-Gene | 4342514 |