RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os07g07719.1 View Network Show in Genome Browser |
Other Names | Os07g0173700 |
Description | ribosomal protein S13p/S18e, putative, expressed |
Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 3883541-3885517 Nucleotide Length: 381 |
Protein-coding | LOC_Os07g07719 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
GO:0003723 | RNA binding | Molecular Function | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os02g06700 LOC_Os02g33140 LOC_Os03g05980 LOC_Os02g27760 LOC_Os03g59310 LOC_Os05g11710 LOC_Os02g14059 LOC_Os06g35730 LOC_Os01g10820 LOC_Os03g26860 LOC_Os01g42640 More.. |
Downstream Genes | LOC_Os11g38959 LOC_Os07g10720 LOC_Os07g10660 LOC_Os08g10608 LOC_Os08g15460 LOC_Os07g41750 LOC_Os09g17840 LOC_Os09g17830 LOC_Os12g38000 LOC_Os09g07910 LOC_Os08g21840 More.. |
Database Links | |
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Gramene | LOC_Os07g07719.1 |
Rice Genome Annotation | LOC_Os07g07719.1 |
Ricechip | LOC_Os07g07719.1 |
KEGG | osa:4342526 dosa:Os07t0173700-00 |
Entrez-Gene | 4342526 |