RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08000.1 View Network Show in Genome Browser |
| Other Names | Os07g0176600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4049754-4054523 Nucleotide Length: 1758 |
| Protein-coding | LOC_Os07g08000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g11730 LOC_Os06g02550 LOC_Os01g10840 LOC_Os02g14130 LOC_Os06g27890 LOC_Os01g51200 LOC_Os06g35530 LOC_Os01g65230 LOC_Os03g21620 LOC_Os06g06090 LOC_Os03g17700 More.. |
| Downstream Genes | LOC_Os07g33850 LOC_Os10g02630 LOC_Os07g30980 LOC_Os07g32380 LOC_Os07g48290 LOC_Os09g30150 LOC_Os10g37740 LOC_Os11g10100 LOC_Os08g38320 LOC_Os07g32400 LOC_Os10g42950 More.. |
| Reference | |
|---|---|
| PubMed | 19224952 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08000.1 |
| Rice Genome Annotation | LOC_Os07g08000.1 |
| Ricechip | LOC_Os07g08000.1 |
| KEGG | osa:4342542 dosa:Os07t0176600-01 |
| Entrez-Gene | 4342542 |