RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08170.1 View Network Show in Genome Browser |
| Other Names | Os07g0178900 |
| Description | ruvB-like, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4150687-4156066 Nucleotide Length: 1368 |
| Protein-coding | LOC_Os07g08170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g08770 LOC_Os03g22900 LOC_Os04g09860 LOC_Os02g08380 LOC_Os05g46330 LOC_Os01g73310 LOC_Os05g01600 LOC_Os03g61970 LOC_Os02g51730 LOC_Os06g04580 LOC_Os05g39050 More.. |
| Downstream Genes | LOC_Os08g09320 LOC_Os08g04280 LOC_Os11g06390 LOC_Os10g36650 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os12g34510 LOC_Os08g33100 LOC_Os07g36140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08170.1 |
| Rice Genome Annotation | LOC_Os07g08170.1 |
| Ricechip | LOC_Os07g08170.1 |
| KEGG | osa:4342553 dosa:Os07t0178900-01 |
| Entrez-Gene | 4342553 |