RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08190.1 View Network Show in Genome Browser |
| Other Names | Os07g0179200 |
| Description | cyclophilin, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4175432-4181649 Nucleotide Length: 1899 |
| Protein-coding | LOC_Os07g08190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49520 LOC_Os05g05860 LOC_Os03g01090 LOC_Os01g72890 LOC_Os04g42010 LOC_Os02g39830 LOC_Os01g16640 LOC_Os01g40840 LOC_Os03g63920 LOC_Os01g67040 LOC_Os01g69970 More.. |
| Downstream Genes | LOC_Os08g29370 LOC_Os07g37830 LOC_Os11g38990 LOC_Os11g07280 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08190.1 |
| Rice Genome Annotation | LOC_Os07g08190.1 |
| Ricechip | LOC_Os07g08190.1 |
| KEGG | osa:4342555 dosa:Os07t0179200-01 |
| Entrez-Gene | 4342555 |