RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08210.3 View Network Show in Genome Browser |
| Other Names | Os07g0179400 |
| Description | cytidylyltransferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4185205-4188035 Nucleotide Length: 564 |
| Protein-coding | LOC_Os07g08210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56980 LOC_Os02g07720 LOC_Os06g49140 LOC_Os03g48000 |
| Downstream Genes | LOC_Os11g03050 LOC_Os12g02820 LOC_Os10g42790 LOC_Os09g17870 LOC_Os08g12830 LOC_Os10g24810 LOC_Os08g06450 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08210.3 |
| Rice Genome Annotation | LOC_Os07g08210.3 |
| Ricechip | LOC_Os07g08210.3 |
| KEGG | osa:4342557 dosa:Os07t0179400-01 |
| Entrez-Gene | 4342557 |