RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08420.1 View Network Show in Genome Browser |
| Other Names | Os07g0182000 |
| Description | bZIP transcription factor domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4322231-4326708 Nucleotide Length: 1311 |
| Protein-coding | LOC_Os07g08420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03960 LOC_Os03g07226 LOC_Os01g55690 |
| Downstream Genes | LOC_Os12g37410 LOC_Os07g11330 LOC_Os07g36920 LOC_Os07g12080 LOC_Os07g11630 |
| Reference | |
|---|---|
| PubMed | 11133985 19473328 21037241 18065552 16798940 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08420.1 |
| Rice Genome Annotation | LOC_Os07g08420.1 |
| Ricechip | LOC_Os07g08420.1 |
| KEGG | osa:4342570 dosa:Os07t0182000-01 |
| Entrez-Gene | 4342570 |