RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08660.1 View Network Show in Genome Browser |
| Other Names | Os07g0184300 |
| Description | 40S ribosomal protein S15, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4460536-4462630 Nucleotide Length: 465 |
| Protein-coding | LOC_Os07g08660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g51630 LOC_Os03g04750 LOC_Os01g54870 LOC_Os04g28180 LOC_Os05g49030 LOC_Os05g39960 LOC_Os01g59990 LOC_Os07g01870 LOC_Os04g50990 LOC_Os04g42380 LOC_Os03g38000 More.. |
| Downstream Genes | LOC_Os11g29190 LOC_Os10g32820 LOC_Os08g13690 LOC_Os09g08430 LOC_Os12g38000 LOC_Os08g41810 LOC_Os07g12250 LOC_Os07g41750 LOC_Os08g10608 LOC_Os11g06750 LOC_Os12g21798 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08660.1 |
| Rice Genome Annotation | LOC_Os07g08660.1 |
| Ricechip | LOC_Os07g08660.1 |
| KEGG | osa:4342580 |
| Entrez-Gene | 4342580 |