RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08840.3 View Network Show in Genome Browser |
| Other Names | Os07g0186000 |
| Description | thioredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4574245-4576234 Nucleotide Length: 264 |
| Protein-coding | LOC_Os07g08840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44500 LOC_Os05g30800 LOC_Os01g16190 LOC_Os02g53060 LOC_Os06g04800 LOC_Os03g58630 LOC_Os04g14680 LOC_Os04g51920 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 More.. |
| Downstream Genes | LOC_Os11g18170 LOC_Os08g44770 LOC_Os07g15670 LOC_Os07g09310 LOC_Os07g36090 LOC_Os08g43560 LOC_Os11g09280 LOC_Os07g44430 LOC_Os10g35720 LOC_Os07g23200 LOC_Os09g27420 More.. |
| Reference | |
|---|---|
| PubMed | 19665023 22010108 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08840.3 |
| Rice Genome Annotation | LOC_Os07g08840.3 |
| Ricechip | LOC_Os07g08840.3 |
| KEGG | osa:4342593 dosa:Os07t0186000-02 |
| Entrez-Gene | 4342593 |