RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08880.3 View Network Show in Genome Browser |
| Other Names | Os07g0186400 |
| Description | ES43 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4606679-4614599 Nucleotide Length: 498 |
| Protein-coding | LOC_Os07g08880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g01970 LOC_Os04g54340 LOC_Os03g51220 LOC_Os02g06592 LOC_Os01g62230 LOC_Os06g08790 LOC_Os03g58400 LOC_Os07g08500 LOC_Os02g38980 LOC_Os02g15220 LOC_Os01g31770 More.. |
| Downstream Genes | LOC_Os10g31900 LOC_Os09g21770 LOC_Os08g32620 LOC_Os07g30980 LOC_Os12g39070 LOC_Os09g33980 LOC_Os11g45590 LOC_Os12g34510 LOC_Os08g33100 LOC_Os07g36140 LOC_Os08g13930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08880.3 |
| Rice Genome Annotation | LOC_Os07g08880.3 |
| Ricechip | LOC_Os07g08880.3 |
| KEGG | osa:4342595 dosa:Os07t0186400-01 |
| Entrez-Gene | 4342595 |