RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08960.1 View Network Show in Genome Browser |
| Other Names | Os07g0187300 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4658901-4662744 Nucleotide Length: 927 |
| Protein-coding | LOC_Os07g08960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g30020 LOC_Os02g02870 LOC_Os03g61220 LOC_Os05g51500 LOC_Os03g59050 LOC_Os04g52200 LOC_Os04g37690 LOC_Os05g30530 LOC_Os03g58810 LOC_Os05g35274 LOC_Os07g08330 More.. |
| Downstream Genes | LOC_Os11g36480 LOC_Os10g39820 LOC_Os08g03520 LOC_Os07g10250 LOC_Os09g02700 LOC_Os11g41890 LOC_Os07g36940 LOC_Os08g22354 LOC_Os07g13280 LOC_Os07g10350 LOC_Os09g19560 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2875 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08960.1 |
| Rice Genome Annotation | LOC_Os07g08960.1 |
| Ricechip | LOC_Os07g08960.1 |
| KEGG | osa:4342599 dosa:Os07t0187300-01 |
| Entrez-Gene | 4342599 |