RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g08970.1 View Network Show in Genome Browser |
| Other Names | Os07g0187400 |
| Description | uncharacterized protein ycf45, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4663405-4667457 Nucleotide Length: 2100 |
| Protein-coding | LOC_Os07g08970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g19150 LOC_Os01g52010 LOC_Os01g51980 LOC_Os05g38150 LOC_Os05g06510 LOC_Os03g59160 LOC_Os06g45360 |
| Downstream Genes | LOC_Os12g02380 LOC_Os11g02450 LOC_Os11g33330 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g08970.1 |
| Rice Genome Annotation | LOC_Os07g08970.1 |
| Ricechip | LOC_Os07g08970.1 |
| KEGG | osa:4342600 dosa:Os07t0187400-00 |
| Entrez-Gene | 4342600 |