RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g09000.1 View Network Show in Genome Browser |
| Other Names | Os07g0187700 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4682480-4687654 Nucleotide Length: 1164 |
| Protein-coding | LOC_Os07g09000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g21970 LOC_Os06g37160 LOC_Os06g07630 LOC_Os05g48510 |
| Downstream Genes | LOC_Os08g01180 LOC_Os08g05890 LOC_Os09g34040 LOC_Os10g37210 |
| Reference | |
|---|---|
| PubMed | 21715673 21753117 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g09000.1 |
| Rice Genome Annotation | LOC_Os07g09000.1 |
| Ricechip | LOC_Os07g09000.1 |
| KEGG | osa:4342601 dosa:Os07t0187700-01 |
| Entrez-Gene | 4342601 |