RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g09040.1 View Network Show in Genome Browser |
| Other Names | Os07g0188266,Os07g0188233 |
| Description | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 4721767-4727024 Nucleotide Length: 1659 |
| Protein-coding | LOC_Os07g09040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g25140 LOC_Os06g20320 LOC_Os06g45340 LOC_Os02g58020 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g09040.1 |
| Rice Genome Annotation | LOC_Os07g09040.1 |
| Ricechip | LOC_Os07g09040.1 |
| KEGG | osa:9270490 osa:9267938 dosa:Os07t0188266-00dosa:Os07t0188233-01 |
| Entrez-Gene | 9270490 |