RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g09720.1 View Network Show in Genome Browser |
| Other Names | Os07g0195400 |
| Description | phosphoacetylglucosamine mutase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 5179086-5182752 Nucleotide Length: 1689 |
| Protein-coding | LOC_Os07g09720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46640 LOC_Os01g43150 LOC_Os01g39250 LOC_Os01g39260 LOC_Os04g52370 LOC_Os06g51029 LOC_Os01g40820 LOC_Os06g12370 LOC_Os06g45820 LOC_Os04g45040 LOC_Os03g50480 More.. |
| Downstream Genes | LOC_Os10g11140 LOC_Os08g10600 LOC_Os10g30580 LOC_Os09g24210 LOC_Os12g03720 LOC_Os11g03900 LOC_Os07g42632 LOC_Os09g31310 LOC_Os08g39300 LOC_Os08g08200 LOC_Os10g35990 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn01110 |
| Metacyc Pathways | UDPNACETYLGALSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g09720.1 |
| Rice Genome Annotation | LOC_Os07g09720.1 |
| Ricechip | LOC_Os07g09720.1 |
| KEGG | osa:4342646 dosa:Os07t0195400-01 |
| Entrez-Gene | 4342646 |