RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g09800.1 View Network Show in Genome Browser |
| Other Names | Os07g0196200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 5216004-5217096 Nucleotide Length: 738 |
| Protein-coding | LOC_Os07g09800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51030 LOC_Os04g55180 LOC_Os02g07220 LOC_Os03g17660 LOC_Os01g31680 LOC_Os01g72950 LOC_Os06g14530 LOC_Os01g55610 LOC_Os01g68450 LOC_Os02g53400 LOC_Os02g16680 More.. |
| Downstream Genes | LOC_Os09g31970 LOC_Os08g40180 LOC_Os08g32930 LOC_Os10g35670 LOC_Os11g47730 LOC_Os09g35800 LOC_Os07g15670 LOC_Os08g30930 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g09800.1 |
| Rice Genome Annotation | LOC_Os07g09800.1 |
| Ricechip | LOC_Os07g09800.1 |
| KEGG | osa:4342649 dosa:Os07t0196200-01 |
| Entrez-Gene | 4342649 |