RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os07g09890.1 View Network Show in Genome Browser
Other Names	Os07g0197100
Description	hexokinase, putative, expressed
Gene Attributes	Chromosome: Chr7 CDS Coordinates (5'-3'): 5256320-5259795 Nucleotide Length: 1530
Protein-coding	LOC_Os07g09890

Gene Ontology Classification
GO	Name	Type	Code
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os06g14510 LOC_Os03g56460 LOC_Os05g07130 LOC_Os03g18310 LOC_Os01g74000 LOC_Os01g40570 LOC_Os02g48110 LOC_Os03g03920 LOC_Os01g44130 LOC_Os01g09460 LOC_Os03g59020 More..
Downstream Genes	LOC_Os10g11140 LOC_Os09g38030 LOC_Os10g39620 LOC_Os08g04280 LOC_Os09g19734 LOC_Os08g42730 LOC_Os11g42160 LOC_Os09g36270 LOC_Os11g34210 LOC_Os07g26540 LOC_Os08g08000 More..

miRNA Regulations
miRNAs	osa-miR3979-5p

Pathways
KEGG Pathways	rn00521 rn00524 rn01110 rn00520 rn00051 rn00052 rn00010 rn01100 rn01120 rn00500
Metacyc Pathways	P124-PWY PWY-6693 PWY-6531 PWY-842 PWY-621 P122-PWY SUCUTIL-PWY PWY-5384 PWY-3801 MANGDPMET-PWY MANNCAT-PWY

Database Links
Gramene	LOC_Os07g09890.1
Rice Genome Annotation	LOC_Os07g09890.1
Ricechip	LOC_Os07g09890.1
KEGG	osa:4342654 dosa:Os07t0197100-01
Entrez-Gene	4342654