RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g10460.1 View Network Show in Genome Browser |
| Other Names | Os07g0204500 |
| Description | 5-nucleotidase surE, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 5613814-5623724 Nucleotide Length: 939 |
| Protein-coding | LOC_Os07g10460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40540 LOC_Os01g56620 LOC_Os02g45660 LOC_Os01g66360 LOC_Os05g41880 LOC_Os06g01470 LOC_Os03g15950 LOC_Os04g58630 LOC_Os01g08540 LOC_Os04g31700 LOC_Os01g31680 More.. |
| Downstream Genes | LOC_Os08g44280 LOC_Os11g16410 LOC_Os09g37600 LOC_Os10g42090 LOC_Os07g30240 LOC_Os09g20820 LOC_Os09g24220 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn00230 rn01100 rn01110 rn00760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g10460.1 |
| Rice Genome Annotation | LOC_Os07g10460.1 |
| Ricechip | LOC_Os07g10460.1 |
| KEGG | osa:4342678 dosa:Os07t0204500-01 |
| Entrez-Gene | 4342678 |