RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g10660.1 View Network Show in Genome Browser |
| Other Names | Os07g0207400 |
| Description | ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 5787215-5789245 Nucleotide Length: 831 |
| Protein-coding | LOC_Os07g10660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g37970 LOC_Os06g02510 LOC_Os03g22180 LOC_Os03g40180 LOC_Os05g19370 LOC_Os01g54870 LOC_Os03g10340 LOC_Os04g52361 LOC_Os05g49030 LOC_Os04g42380 LOC_Os03g04750 More.. |
| Downstream Genes | LOC_Os09g31180 LOC_Os07g47780 LOC_Os10g32820 LOC_Os12g21798 LOC_Os07g10720 LOC_Os12g38000 LOC_Os07g12250 LOC_Os08g10608 LOC_Os11g29190 LOC_Os10g32920 LOC_Os09g08430 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g10660.1 |
| Rice Genome Annotation | LOC_Os07g10660.1 |
| Ricechip | LOC_Os07g10660.1 |
| KEGG | osa:4342695 dosa:Os07t0207400-01 |
| Entrez-Gene | 4342695 |