RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g10690.3 View Network Show in Genome Browser |
| Other Names | Os07g0207700 |
| Description | NLI interacting factor-like phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 5805373-5811941 Nucleotide Length: 1386 |
| Protein-coding | LOC_Os07g10690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32430 LOC_Os03g63300 LOC_Os01g47540 LOC_Os01g51640 LOC_Os05g38710 LOC_Os02g11830 LOC_Os03g17990 LOC_Os02g30630 LOC_Os06g05180 LOC_Os05g29050 LOC_Os01g38970 More.. |
| Downstream Genes | LOC_Os08g21760 LOC_Os12g37360 LOC_Os11g10100 LOC_Os10g41450 LOC_Os11g31890 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5797 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g10690.3 |
| Rice Genome Annotation | LOC_Os07g10690.3 |
| Ricechip | LOC_Os07g10690.3 |
| KEGG | osa:4342696 dosa:Os07t0207700-02 |
| Entrez-Gene | 4342696 |