RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os07g12110.1 View Network Show in Genome Browser |
Other Names | Os07g0222300 |
Description | eukaryotic translation initiation factor 3 subunit E, putative, expressed |
Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 6763480-6767329 Nucleotide Length: 1320 |
Protein-coding | LOC_Os07g12110 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0009908 | flower development | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0009791 | post-embryonic development | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
GO:0005737 | cytoplasm | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g16890 LOC_Os03g14530 LOC_Os02g27760 LOC_Os07g10720 LOC_Os01g22490 LOC_Os06g04290 LOC_Os07g03230 LOC_Os04g51630 LOC_Os05g06770 LOC_Os03g27260 LOC_Os02g48660 More.. |
Downstream Genes | LOC_Os10g08930 LOC_Os08g39500 LOC_Os08g13690 LOC_Os07g12250 LOC_Os08g44480 LOC_Os12g05430 LOC_Os08g02410 LOC_Os09g31180 LOC_Os07g42950 LOC_Os11g05562 LOC_Os09g39540 More.. |
Database Links | |
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Gramene | LOC_Os07g12110.1 |
Rice Genome Annotation | LOC_Os07g12110.1 |
Ricechip | LOC_Os07g12110.1 |
KEGG | osa:4342741 dosa:Os07t0222300-01 |
Entrez-Gene | 4342741 |