RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g12170.1 View Network Show in Genome Browser |
| Other Names | Os07g0223100 |
| Description | ADP-ribosylation factor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 6808787-6812103 Nucleotide Length: 915 |
| Protein-coding | LOC_Os07g12170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g41060 LOC_Os01g59790 LOC_Os03g59740 LOC_Os01g16030 LOC_Os03g14260 LOC_Os02g22090 LOC_Os06g42000 LOC_Os03g13970 LOC_Os04g52270 LOC_Os03g50290 LOC_Os03g17020 More.. |
| Downstream Genes | LOC_Os07g12200 LOC_Os09g34970 LOC_Os08g15040 LOC_Os11g07280 LOC_Os09g24260 LOC_Os12g37360 LOC_Os09g31180 LOC_Os08g41250 LOC_Os11g28340 LOC_Os11g06340 LOC_Os11g06330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g12170.1 |
| Rice Genome Annotation | LOC_Os07g12170.1 |
| Ricechip | LOC_Os07g12170.1 |
| KEGG | osa:4342745 dosa:Os07t0223100-01 |
| Entrez-Gene | 4342745 |