RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g12250.1 View Network Show in Genome Browser |
| Other Names | Os07g0224000 |
| Description | ribosomal protein L24, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 6864679-6866876 Nucleotide Length: 486 |
| Protein-coding | LOC_Os07g12250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54870 LOC_Os05g49030 LOC_Os01g47660 LOC_Os04g28180 LOC_Os03g37970 LOC_Os03g60400 LOC_Os01g61814 LOC_Os02g28810 LOC_Os06g02510 LOC_Os03g59310 LOC_Os05g28750 More.. |
| Downstream Genes | LOC_Os09g32976 LOC_Os08g23710 LOC_Os11g29190 LOC_Os12g38000 LOC_Os10g08930 LOC_Os11g05562 LOC_Os07g42950 LOC_Os08g10608 LOC_Os12g21798 LOC_Os09g08430 LOC_Os10g32920 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5533 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g12250.1 |
| Rice Genome Annotation | LOC_Os07g12250.1 |
| Ricechip | LOC_Os07g12250.1 |
| KEGG | osa:4342748 dosa:Os07t0224000-00 |
| Entrez-Gene | 4342748 |