RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g12640.1 View Network Show in Genome Browser |
| Other Names | Os07g0229800 |
| Description | glycerol-3-phosphate dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 7229011-7232294 Nucleotide Length: 765 |
| Protein-coding | LOC_Os07g12640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39270 LOC_Os04g42930 LOC_Os02g35500 LOC_Os01g53910 LOC_Os02g43180 LOC_Os02g40500 LOC_Os06g12030 LOC_Os01g27140 LOC_Os06g44910 LOC_Os04g32510 LOC_Os05g34240 More.. |
| Downstream Genes | LOC_Os12g25690 LOC_Os12g29990 LOC_Os08g45140 LOC_Os12g35340 LOC_Os11g43520 LOC_Os08g37860 LOC_Os11g43530 LOC_Os12g35330 LOC_Os12g24020 LOC_Os11g43550 LOC_Os08g21330 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3921 PANTO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g12640.1 |
| Rice Genome Annotation | LOC_Os07g12640.1 |
| Ricechip | LOC_Os07g12640.1 |
| KEGG | osa:4342770 dosa:Os07t0229800-01 |
| Entrez-Gene | 4342770 |