RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g12770.1 View Network Show in Genome Browser |
| Other Names | Os07g0231400 |
| Description | transmembrane amino acid transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 7310212-7313078 Nucleotide Length: 1275 |
| Protein-coding | LOC_Os07g12770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g54790 LOC_Os05g35730 LOC_Os03g20750 LOC_Os01g65070 LOC_Os01g16910 LOC_Os05g08360 LOC_Os02g57590 LOC_Os04g44060 LOC_Os02g57720 LOC_Os02g40870 LOC_Os03g22880 More.. |
| Downstream Genes | LOC_Os12g13390 LOC_Os07g15880 LOC_Os09g33450 LOC_Os08g42620 LOC_Os07g39870 LOC_Os08g42370 LOC_Os11g20790 LOC_Os07g26690 LOC_Os10g36760 LOC_Os12g38570 LOC_Os07g26630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g12770.1 |
| Rice Genome Annotation | LOC_Os07g12770.1 |
| Ricechip | LOC_Os07g12770.1 |
| KEGG | osa:4342775 dosa:Os07t0231400-01 |
| Entrez-Gene | 4342775 |