RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g12890.2 View Network Show in Genome Browser |
| Other Names | Os07g0232800 |
| Description | metal cation transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 7394515-7397715 Nucleotide Length: 1074 |
| Protein-coding | LOC_Os07g12890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g30800 LOC_Os01g16190 LOC_Os05g51130 LOC_Os06g40500 LOC_Os02g41890 LOC_Os01g58730 LOC_Os01g40860 LOC_Os02g35870 LOC_Os02g38200 LOC_Os03g61560 LOC_Os03g04070 More.. |
| Downstream Genes | LOC_Os08g36420 LOC_Os07g42960 LOC_Os09g04339 LOC_Os11g38780 LOC_Os09g29840 LOC_Os09g20090 LOC_Os08g17680 LOC_Os09g19734 LOC_Os11g09010 LOC_Os09g21520 LOC_Os09g27830 More.. |
| Reference | |
|---|---|
| PubMed | 20496122 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g12890.2 |
| Rice Genome Annotation | LOC_Os07g12890.2 |
| Ricechip | LOC_Os07g12890.2 |
| KEGG | osa:4342782 dosa:Os07t0232800-00 |
| Entrez-Gene | 4342782 |