RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g13460.1 View Network Show in Genome Browser |
| Other Names | Os07g0238800,Os07g0238700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 7717781-7723659 Nucleotide Length: 2070 |
| Protein-coding | LOC_Os07g13460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g20890 LOC_Os03g05220 LOC_Os06g25500 LOC_Os06g25470 LOC_Os06g31220 LOC_Os02g05790 LOC_Os01g11370 LOC_Os04g20270 LOC_Os03g49520 LOC_Os01g62650 LOC_Os01g08930 More.. |
| Downstream Genes | LOC_Os08g37904 LOC_Os12g13290 LOC_Os09g27970 LOC_Os10g26859 LOC_Os10g26850 LOC_Os08g19310 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g13460.1 |
| Rice Genome Annotation | LOC_Os07g13460.1 |
| Ricechip | LOC_Os07g13460.1 |
| KEGG | osa:4342800 osa:4342799 dosa:Os07t0238800-01dosa:Os07t0238700-01 |
| Entrez-Gene | 4342800 |