RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os07g13580.1 View Network Show in Genome Browser |
| Other Names | Os07g0240200 |
| Description | glucan endo-1,3-beta-glucosidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr7 CDS Coordinates (5'-3'): 7786773-7788855 Nucleotide Length: 1506 |
| Protein-coding | LOC_Os07g13580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46330 LOC_Os06g08380 LOC_Os01g55040 LOC_Os07g08330 LOC_Os05g41610 LOC_Os01g47070 LOC_Os03g03610 LOC_Os06g51270 LOC_Os05g47480 |
| Downstream Genes | LOC_Os09g36440 LOC_Os10g22570 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os07g13580.1 |
| Rice Genome Annotation | LOC_Os07g13580.1 |
| Ricechip | LOC_Os07g13580.1 |
| KEGG | osa:4342805 dosa:Os07t0240200-01 |
| Entrez-Gene | 4342805 |